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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795373.1_cds_XP_016443677.1_3798
CDS Infomation

[gene=LOC107769015] [db_xref=GeneID:107769015] [protein=mitogen-activated protein kinase kinase kinase NPK1-like] [protein_id=XP_016443677.1] [location=complement(join(31485..31588,33111..33178,33260..33573,33673..33897,33986..34184,34865..34914,34992..35051,35140..35179,35520..35620,35736..35817,36944..37026,37111..37188,37262..37342,37433..37543,37618..37683,38227..38268,38403..38702))] [gbkey=CDS]
Sequence

ATGCAAGATATTTTTGGATCAGTTCGGCGATCACTGGTGTTCCGAACACCGACTGCCGAC
GGTGGAGATGACGGTAATCTAGTTGAGAAGATCAATTCCTGCATCCGGAACTCCAGAGTT
TTCTCTAAGCTGTCGCCTCCTCCGCCGGCGTTGCCCTCACCAAAAGCCGTTAAAGATGAA
GGTGATGCGGCTCCCCGGCCTATCCGGTGGAGAAAAGGTGAGATGATTGGATGTGGCGCT
TTTGGACAGGTTTATATGGGAATGAATCTCGATTCTGGTGAACTTCTCGCCGTCAAGCAG
GTTTTGATAGCTGCGAACGGTGCTTCAAAGGAGAAAGCTCAGTCCCACGTTAAAGAGCTT
GAGGAGGAAGTCAAGCTTCTCAAGAATCTCTCGCATCCACATATTGTTAGATATCTTGGA
ACTGTGAGAGAAGAAGACACATTGAATATTCTGCTGGAATTCGTACCTGGTGGATCGATA
TCATCCCTTTTAGGCAAATTTGGATCTTTCCCTGAGCCAGTTATAAGAACGTACACTAAG
CAATTGCTCCTAGGGCTGGATTATCTTCACAAGAATGGAATCATGCATAGAGATATTAAG
GGGGCCAATATCCTTGTTGATAACAAAGGTTGCATAAAGCTGGCTGACTTTGGGGCATCA
AAGAAGGTTGTCGAACTGGCTACTATATCAGGCGCCAAGTCCATGAAGGGCACACCATAC
TGGATGGCTCCTGAGGTCATTCGCCAAACCGGTCATAGCTTCTCTGCTGATATATGGAGC
GTAGGATGTACTGTAATAGAGATGACTACTGGCAAGCCACCCTGGAGCCAACAGTATCAA
GAGGTTGCTGCGCTCTTCTATATTGGGACAACAAAAGCTCATCCTCCGATCCCTGAACAT
CTGTCTGTTGAAGCAAAAGACTTTCTGCTGAAATGCTTACAAAAGGAACCAGAGTTAAGA
CTATCAGCTAGTGAGTTGTTACAGCATCCATTTGTCACTGGTGAAGCACAACTATCTCCT
CCTGATGGTTCTAATTCCATGATGGGCAAATCTCAAGCTCATTCTGATTCAAATGGGCAT
AATGGAAAAAGCGTTGCTGGTTCAATAGACATCTGCAACTTGGGTACCTTGAATATCTCA
ACAGAAAATGCATGTACCTTGTCGGAGACCGGACATAAGTGGAGAGGAAACAGTAGTGAT
GATGATATGTGTCAGATTGACGATACTGATAATTTTTTCTTGGGTGGAGGAACGAAGTTA
AGCACTGCTAAGACGGTGGATGACTTCAATAAGAGTTTCAATCCCATCTCTGAGCCCTCT
GATGATTGGAACTGTGATTATGGCATGACTCAATCACAACAAGGGAATGCAAATATAGTT
AGCAATCAGGAAGGTGGCATAGGTGATGGGATTTCAGTCTCGCCTAACAACAATTCTGCA
GTTTTTTGTGGTCCTTCCATATCAGAAGATGAGGATGAGCTTACTGAGTCTAAAATCAGA
GCCTTCCTGGATGAAAAGGCTCTTGAATTGAAGAAACTGCAGACACCTCTGTATGAAGAG
TACTATAACAACAGTTTGAATCCTTCATACTCTCCACAGTTGGCTGAGACTGCAATCGAT
GAAACCACTCCAAAATACTTGAAATTACCCCCGAAAAGTAGGTCACCAAGTAGGGTTCCT
ATTGGAAGCCCGTCTACAGGAGTTGATATCATCAATAGTGCAAGCCCTGGGAGCAGCAAC
AGGCGAACATCATGCATTGGCAGTGGAAGCAACCAAGACTATGATGACAGTTCACCGCAA
TCTAATGAGCGGAGGCAATCAAATAGTCCAATTGCAAGTTTTAGTGAGATTCAGAGGAAG
TGGAAGGAAGAGCTTGACCAAGAGCTTGAAAGAAAGCGAGAAATGATGCGTCAAGCAGGT
GTGGGGGGGAAAACATCTTCTCCCAAGGATCGAGCTTTGAATCGACAGAGAGAGCGTTCA
AGGTTTGCATCTCCAGGAAAATGA

Peptide Sequence

PEP ID

XP_016443677.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Nicotiana tabacum]
Sequence

MQDIFGSVRRSLVFRTPTADGGDDGNLVEKINSCIRNSRVFSKLSPPPPALPSPKAVKDE
GDAAPRPIRWRKGEMIGCGAFGQVYMGMNLDSGELLAVKQVLIAANGASKEKAQSHVKEL
EEEVKLLKNLSHPHIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGSFPEPVIRTYTK
QLLLGLDYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATISGAKSMKGTPY
WMAPEVIRQTGHSFSADIWSVGCTVIEMTTGKPPWSQQYQEVAALFYIGTTKAHPPIPEH
LSVEAKDFLLKCLQKEPELRLSASELLQHPFVTGEAQLSPPDGSNSMMGKSQAHSDSNGH
NGKSVAGSIDICNLGTLNISTENACTLSETGHKWRGNSSDDDMCQIDDTDNFFLGGGTKL
STAKTVDDFNKSFNPISEPSDDWNCDYGMTQSQQGNANIVSNQEGGIGDGISVSPNNNSA
VFCGPSISEDEDELTESKIRAFLDEKALELKKLQTPLYEEYYNNSLNPSYSPQLAETAID
ETTPKYLKLPPKSRSPSRVPIGSPSTGVDIINSASPGSSNRRTSCIGSGSNQDYDDSSPQ
SNERRQSNSPIASFSEIQRKWKEELDQELERKREMMRQAGVGGKTSSPKDRALNRQRERS
RFASPGK

Transcript Sequence

Gene sequence data has not been registered.